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Home » Recipes » Cakes & Cupcakes

Chocolate Cupcakes with Cream Cheese Frosting

Published: Jun 8, 2025 · Modified: Dec 18, 2025 by Lisa Flinn · 2 Comments

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These super moist Chocolate Cupcakes with Cream Cheese Frosting is a classic combination that is perfect for any occasion. Rich chocolate cake is topped with a sweet and tangy cream cheese frosting and decorated with edible flowers for a special touch.

Chocolate cupcakes with cream cheese frosting decorated with edible flowers are sitting on a marble serving board.

Chocolate cupcakes with cream cheese frosting is one of my favorite flavor combinations. It reminds me of red velvet cupcakes, but way more chocolatey. The chocolate cupcakes are rich, decadent, and has a deep chocolate flavor, thanks to Dutch-cocoa powder and the addition of espresso powder. We're also using oil instead of butter which keeps the cupcakes soft for days, even straight from the fridge!

If you are a chocolate lover, you'll definitely want to check out my malted chocolate cake, chocolate gooey butter cake and triple chocolate muffins next!

Jump to:
  • ♡ Why You Will Love These Chocolate Cupcakes with Cream Cheese Frosting
  • Ingredient Notes
  • Step-By-Step Instructions
  • 💡 Tip
  • Substitutions
  • Variations
  • Key Equipment
  • Storage
  • ⭐️ Expert Tips
  • FAQ
  • You May Also Like...
  • ♡ Did you try this recipe?
  • 📖 Recipe

♡ Why You Will Love These Chocolate Cupcakes with Cream Cheese Frosting

  • The best chocolate cupcake recipe. These cupcakes have a light and moist crumb with a deeply rich chocolate flavor that I know you are going to love!
  • Tangy cream cheese frosting. The frosting is slightly tangy and pairs wonderfully with the dark chocolate cupcake. Plus, it stable enough to pipe and isn't too sweet.
  • Easy to make. The cupcake batter takes 10 minutes to whip up and takes 16 minutes to bake.
Chocolate cupcakes with cream cheese frosting decorated with edible flowers are sitting on a marble serving board.

Ingredient Notes

Here are some notes about all the ingredients used in these Chocolate Cupcakes with Cream Cheese Frosting. Quantities and full instructions are in the recipe card below!

Chocolate cupcake ingredients which include, all-purpose flour, unsweetened cocoa powder, espresso powder, salt, baking soda, baking powder, sour cream, egg, vanilla, oil, boiling hot water.
Chocolate Cupcake Ingredients
  • All-Purpose Flour - I recommend using a kitchen scale to measure your flour with for best results. Adding too much flour can make your cupcakes dry and dense rather than light and moist.
  • Unsweetened Cocoa Powder - Make sure you're using Dutch-process cocoa powder. Natural cocoa powder is acidic and would not work with the quantity of leveners we have in this recipe.
  • Leveners - We are using a combination of baking powder and baking soda for the perfect rise and texture.
  • Fine Espresso Powder - Enhances the chocolate flavor.
  • Salt - Rounds out the flavors and balances the sweetness.
  • White Sugar - Adds a bit of sweetness and adds moisture.
  • Neutral Oil - The oil makes the cupcakes light and moist.
  • Full-Fat Sour Cream - Adds moisture.
  • Whole Egg - Adds structure.
  • Vanilla Paste or Extract - For flavor.
  • Boiling Hot Water - The hot water blooms the espresso and cocoa powder.
Easy cream cheese frosting ingredients which include, cream cheese, butter, salt, vanilla and powdered sugar.
Cream Cheese Frosting
  • Cream Cheese Brick - Make sure to use full-fat cream cheese brick, not whipped cream cheese in a tub.
  • Unsalted Butter - You can use salted or unsalted butter for the frosting. If using salted, you can omit the salt.
  • Powdered Sugar - Adds sweetness and thickens the frosting.
  • Salt - Balances the sweetness.
  • Vanilla Extract or Paste - For flavor.

*See recipe card for quantities.

Step-By-Step Instructions

Here are step-by-step photos and instructions on how to make these Chocolate Cupcakes with Cream Cheese Frosting! Please find detailed instructions in the recipe card at the end of this post.

All-purpose flour, unsweetened cocoa powder, fine espresso powder, baking soda, baking powder and salt are whisked together until combined.

Step 1. In a medium bowl, combine flour, cocoa powder, espresso powder, baking powder, baking soda and salt.

Sugar, oil, egg, sour cream and vanilla is in a large mixing bowl.

Step 2. In a large bowl, add white sugar, oil, sour cream, egg and vanilla.

The wet ingredients are whisked together until combined.

Step 3. Using a hand whisk, whisk until well combined.

Flour/cocoa powder mixture is added to the wet ingredients.

Step 4. Sift dry ingredients into the wet ingredients.

Chocolate cupcake batter is mixed together in large glass bowl.

Step 5. Whisk until nearly combined. The batter will be thick.

Hot boiling water is added to the chocolate cupcake batter.

Step 6. Add hot boiling water and gently whisk until just combined. Do not overmix.

Chocolate cake batter is scooped ⅔ rds full into cupcake liners in a cupcake pan.

Step 7. Fill cupcake cavities ⅔rds full. Lift and drop the pan off the counter a few times to knock out any air bubbles.

Chocolate cupcakes are cooling on a wire rack.

Step 8. Bake in a preheated oven at 350ºF (176ºc) for about 16 minutes or until an inserted toothpick comes out clean.

💡 Tip

Fill cupcake cavities ⅔rds full. A #20 cookie scoop, which holds about 3 tablespoons, is the perfect amount.

Softened butter and cream cheese are whipped together in a stand mixer bowl until smooth.

Step 9. Cream together softened butter, cream cheese, salt and vanilla until smooth.

Powdered sugar is added to the butter and cream cheese mixture.

Step 10. Gradually whisk in the powdered sugar until you reach your desired consistency. 

Fluffy cream cheese frosting is whipped in a stand mixer bowl.
Chocolate cupcakes are frosted with cream cheese frosting, using a close star piping tip.

Step 11. Frost your cooled cupcakes by filling a pastry bag fitted with a piping tip of your choice or add a large spoonful of frosting to the top of each cupcake and use an offset spatula or spoon to gently spread it out. Serve and enjoy!

Chocolate cupcakes with cream cheese frosting decorated with edible flowers are sitting on a marble serving board.

Substitutions

  • Sour Cream - You can easily replace with full-fat Greek yogurt.
  • Neutral Oil - You can use avocado oil, vegetable oil, canola oil, refined coconut oil or grapeseed oil.
  • Fine Espresso Powder - Highly recommended, but you can omit completely if don't have any in your pantry. Or you can use hot coffee inplace of hot water.
  • Boiling Hot Water - You can also use hot coffee.

Variations

  • Fill your Cupcakes - To add even more chocolate flavor, you can fill it with Nutella or a chocolate ganache as seen here in these triple chocolate muffins. You can also fill with fruit jams, pistachio cream, and lemon curd.
  • Other Garnishes - Instead of edible flowers, you can keep it plain or simply top with mini chocolate chips, rainbow sprinkles, chocolate sprinkle, cookie crumbs or berries.
  • Try Other Frostings - You can making chocolate cream cheese frosting by adding ½ cup to ⅔ cup unsweetened cocoa powder to the frosting. You can also try my delicious maple cream cheese frosting. If you love citrus, then you will love my lemon cream cheese frosting, blood orange cream cheese frosting
  • For a Gluten-Free Option - You can use a 1-to-1 cup gluten-free flour blend.

Key Equipment

  • Digital Kitchen Scale - Using a scale will give you the most accurate measurements. Gram measurements are written in the recipe card below.
  • Bowls
  • Hand Whisk
  • Standard Cupcake/Muffin Pan
  • Cupcake Liners
  • Measuring Spoons
  • Electric Mixer - You'll need a mixer to make the cream cheese frosting. You can use a handheld or stand mixer fitted with the paddle attachment.

Storage

  • Room Temperature - Unfrosted cupcakes can be stored in an airtight container at room temperature for up to 3 days.
  • Refrigerator - Frosted cupcakes can be stored in an airtight container in the fridge for up to 5 days. You can enjoy it cold from the fridge or let it come to room temperature.
  • Freezer - Frosted cupcakes can also be frozen and stored in a freezer safe container for up to 1 month. Allow to come to room temperature before consuming.

⭐️ Expert Tips

Use a kitchen scale to weigh all your ingredients. Baking in grams, rather than volume, is the best and most accurate way to bake! All my recipes include gram conversions based on King Arthur's Weight Chart.

If you are not using a kitchen scale, measure your flour correctly. Fluff and aerate your flour first, then spoon into your measuring cup and finally level off with the back of a butter knife. Do not pack it in as it will add too much flour.

Don't forget to sift the dry ingredients. For light cupcakes, you'll want to sift your dry ingredients through a fine sieve. Cocoa powder is especially lumpy.

Make sure to use room temperature ingredients. Using room temperature ingredients will help the batter emulsify better, ensuring a smooth batter. Leave your egg and sour cream on the counter for about an hour for best results.

FAQ

What is Dutch-process cocoa powder?

Dutch cocoa powder has undergone a process of dealkalization, in which the natural acidity from chocolate is strip away, leaving you with a smoother and rich chocolate flavor. It's also darker in color and has a reddish tint. Natural cocoa powder, on the other hand, is lighter in color, acidic, and sharp in flavor.

Chocolate cupcakes with cream cheese frosting decorated with edible flowers are on dessert plates.

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♡ Did you try this recipe?

Please consider leaving a 5-star rating and review below. This provides helpful feedback to myself and other readers. Thank you so much!

📖 Recipe

Chocolate cupcakes with cream cheese frosting decorated with edible flowers are sitting on a marble serving board feature photo.

Chocolate Cupcakes with Cream Cheese Frosting

Lisa Flinn
These super moist Chocolate Cupcakes with Cream Cheese Frosting is a classic combination that is perfect for any occasion. Rich chocolate cake is topped with a sweet and tangy cream cheese frosting and decorated with edible flowers for a special touch.
5 from 1 vote
Print Recipe Pin Recipe
Prep Time 30 minutes mins
Cook Time 16 minutes mins
Total Time 46 minutes mins
Course Cakes, Dessert
Cuisine American
Yields 16 Cupcakes

INGREDIENTS

Chocolate Cupcakes

  • 1 cup (120g) all-purpose flour
  • ½ cup (42g) dutch cocoa powder
  • 1 teaspoon fine espresso powder (optional, but recommended)
  • ¾ teaspoon baking powder
  • ½ teaspoon baking soda
  • ½ teaspoon salt
  • 1 cup (200g) granulated white sugar
  • ⅓ cup + 1 tablespoon (80g) neutral oil (avocado, vegetable, canola)
  • ⅓ cup (76g) full-fat sour cream room temp
  • 1 whole large egg room temp
  • 1 teaspoon pure vanilla extract
  • ½ cup (113g) boiling water

Cream Cheese Frosting

  • 6 oz (170g) brick full-fat cream cheese room temp
  • ½ cup (113g) unsalted butter room temp
  • 1 teaspoon pure vanilla extract
  • ⅛ teaspoon fine salt
  • 3 to 3½ cups (339g to 395g) powdered sugar
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Instructions
 

  • Preheat oven to 350ºF (176ºC). Add paper liners to a cupcake tin. This recipe makes about 16 cupcakes, so you can line another cupcake pan with a few extra liners or bake in batches.
  • Make Chocolate Cupcakes - In a small mixing bowl, whisk together the flour, Dutch cocoa powder, fine espresso powder, baking powder, baking soda, and salt.
    1 cup (120g) all-purpose flour
    ½ cup (42g) dutch cocoa powder
    1 teaspoon fine espresso powder (optional, but recommended)
    ¾ teaspoon baking powder
    ½ teaspoon baking soda
    ½ teaspoon salt
  • In a large bowl and using a hand whisk, whisk together sugar, oil, egg, sour cream and vanilla until well combined.
    1 cup (200g) granulated white sugar
    ⅓ cup + 1 tablespoon (80g) neutral oil (avocado, vegetable, canola)
    ⅓ cup (76g) full-fat sour cream
    1 whole large egg
    1 teaspoon pure vanilla extract
  • Sift in the dry ingredients, ensuring the cocoa powder lumps are push through the sieve. Gently whisk the dry and wet ingredients together until nearly incorporated. Add boiling hot water and gently whisk until just combined. The batter will thin out a bit. Do not overmix.
    ½ cup (113g) boiling water
  • Scoop and fill each cupcake cavity ⅔rds full. Lift and drop the pan off the counter a few times to knock out any air bubbles. Bake for about 16 minutes or until a toothpick inserted in the center comes out clean. Every oven is different so timing can vary for you. If you only have 1 cupcake pan, cover the remaining batter with a kitchen towel to bake after.
  • Let cupcakes sit in the pan for a minute, then carefully remove them and place on a wire rack to cool completely.
  • Make Cream Cheese Frosting - In a large mixing bowl, add room temperature cream cheese, room temperature butter, fine salt and vanilla. Whip on medium speed until fluffy and smooth. You can use a stand mixer fitted with a paddle attachment or a hand-held electric mixer.
    6 oz (170g) brick full-fat cream cheese
    ½ cup (113g) unsalted butter
    1 teaspoon pure vanilla extract
    ⅛ teaspoon fine salt
  • Starting on low speed then increase to medium speed as you go, gradually whisk in the powdered sugar, a cup at a time, until you reach your desired consistency. If you'd like a thicker frosting, add more powdered sugar. 
    3 to 3½ cups (339g to 395g) powdered sugar
  • Frost your cooled cupcakes by filling a pastry bag fitted with a piping tip of your choice. You can also, add a large spoonful of frosting to the top of each cupcake and use an offset spatula or spoon to gently spread it out. Decorate with edible flowers or sprinkles if desired. Serve and enjoy!

Notes

Unsweetened Cocoa Powder - Make sure to use Dutch-process Cocoa Powder and not natural cocoa powder for this recipe.  Droste, Rodelle, Ghiradelli and Hershey's Special Dark  are all great Dutch cocoa powders that I have enjoyed using. 
Do Not Overfill Cupcakes - Fill cupcake cavities ⅔rds full. I used a #20 cookie scoop, which holds about 3 tablespoons of batter.
Cream Cheese Frosting - If your frosting is a bit soft, you can place it in the fridge for about 20 minutes and let it firm up a bit before piping.
Piping Tips - I used an Ateco #849 (closed star tip), but you could also use a 1M tip or an Ateco #826 (open star tip).
Storage - Frosted cupcakes can be stored in an airtight container in the fridge for up to 5 days. You can enjoy it cold from the fridge or let it come to room temperature.
Keyword chocolate cupcakes, cream cheese frosting, cupcakes, dutch cocoa powder
Did you try this recipe?Share your photo and tag us @shortstackkitchen on Instagram!

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Comments

  1. Carrie says

    July 05, 2025 at 1:11 pm

    5 stars
    Turned out beautifully. Thanks!

    Reply
    • Lisa Flinn says

      July 05, 2025 at 10:58 pm

      Glad to hear it! Thank you for trying the recipe! 😊

      Reply
5 from 1 vote

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Hi, I'm Lisa! I'm the photographer, recipe developer, and content creator behind Short Stack Kitchen! Here you'll find both, sweet and savory treats to satisfy all your cravings.

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